Simple gene ontology and pathway enrichment from a gene list

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Published 2022-01-08

Here I show you how to use the DAVID functional annotation resource to easily do gene ontology and KEGG pathway enrichment from a gene list. This method takes genes in almost any format and is incredibly easy to use. This requires no programatic skills and barely any thinking--even though I can do this in Python or R, I often use this method just to check something quickly or when I am feeling lazy.

DAVID: david.ncifcrf.gov/

All Comments (7)

@shobeynarenmohan5328 1 year ago

Have been struggling hard to learn this. Thank You for such a simple presentation. I needed this tutorial the most !!!
@FiifiAB 1 year ago

Thanks Sanbomics. Can DAVID functional annotation be used for non-model species (i.e. those without sequenced genome)?
@human2951 1 year ago

I DIDNT GET THAT HOW TO SELECT ONE SPECIFIC PATHWAY FOR YOUR GENES. PLEASE GUIDE ABOUT IT
@suluhnusantoro5209 1 year ago

thank you very much
@Marwan-ej7xt 1 year ago

This pathways are not cluster specific right? You just uploaded all differential expressed genes.
@Aigle20350 5 months ago

David is way too old. There is no guarantee that their database gets updated frequently.