Basics of Molecular Dynamics Simulations for Beginners

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Published 2018-04-02
This video introduces the very basics of molecular dynamics (MD) simulations—the most popular technique to simulate the dynamics of atoms and molecules. We review the concepts of interatomic potential (energy of interaction between atoms) or forcefield, molecular dynamics iterative algorithm, time discretization, and numerical integration.

All Comments (21)
  • @aliciascience
    Thank you so much for this lucid and concise introduction!
  • @purvaashtri
    Was very helpful to get an insight into what molecular dynamics is. Eager to see more such videos. :)
  • @khaled-ik1ez
    This was an amazing video. thank you! I just wanted to make sure that everything I know is right or not.
  • @CoconutSundae
    Wonderfully explained, thanks so much for making this for us!
  • @LeeZhenYong
    After going through a lot of convoluted material on this subject, this video is a breath of fresh air.
  • @Ericlau1126
    Its very straight forward and easy understanding! Thanks for your teaching!
  • @hashrafi7148
    sometimes we know how to run a simulation but don't know what we are exactly calculating. this simple video is great!
  • @MrThrenorius
    Perfect sir ! The most useful video on MD for noobies, so far :)
  • @gabco11
    C'était très clair, tu gères ! Merci :)
  • @cajusammon1170
    Could you make a video explaining (Mesh) Ewald Summation, which seems to play a big role in MD?
  • @atalvats
    This was actually a very lucid way of explaining this topic! Loved it!
  • @cmlnm
    Thank you very much for the course, which is very informative for me as a beginner.
  • Very useful video, teaches the theory behind the simulation with so much ease